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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12468294_12469171_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12468294 - 12469171

Intron Length:

878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTCATTT

5'SS Class:

weak_major

3'SS Sequence:

GTGTCATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TGTTTTATAACT

Flanking Amino Acid:

AICICDEGYQGDDCSVFSHD

Intron Amino Acid Position:

3253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.3

66.3

39.9

Major BPS

77.9

0.69

78.3

31.3

Major PPT

73.5

0.53

0.9

70.5

40.2

Minor 5ss

56.6

0.22

2.5

74.6

41.4

Minor BPS

68.3

0.65

1.6

85.23

34.7

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130