Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_124692005_124695158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124692005 - 124695158

Intron Length:

3154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGCAT

U12 Branch Point Sequence:

CTTGCATTAAGT

Flanking Amino Acid:

ERREEREKYLAAREQQILEK

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

65.2

41.6

Major BPS

62.7

0.32

1.4

39.9

Major PPT

70.9

0.47

75.7

33.1

Minor 5ss

37.5

-1.4

44.3

45.4

Minor BPS

55.8

0.26

2.1

76.66

45.8

Associated Gene:

Gene:

MAP7D2

Ensembl Gene ID:

ENSAPLG00000005077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042733

124653617 - 124726432

72816

ENSAPLT00000005254

124653617 - 124726432

72816