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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12470583_12472126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12470583 - 12472126

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATGCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATGC

Flanking Amino Acid:

IQPGYMMQFKIVVGCEATSC

Intron Amino Acid Position:

3122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.56

0.9

69.1

36.8

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

63.8

0.41

1.9

77.75

38.7

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011979

12456661 - 12742790

286130

ENSAPLT00000047207

12456661 - 12742790

286130