Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_124747400_124749499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124747400 - 124749499

Intron Length:

2100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTCTT

5'SS Class:

major

3'SS Sequence:

TTTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

VDMKKMVTKYRAASSHTTER

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

76.3

38.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.1

0.9

0.7

90.1

24.5

Minor 5ss

46.3

-0.4

2.8

67.8

43.1

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

BCLAF3

Ensembl Gene ID:

ENSAPLG00000005332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031050

124743759 - 124763122

19364

ENSAPLT00000005512

124743759 - 124764578

20820