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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12475994_12476589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12475994 - 12476589

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

ACCTTCATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TTTATGTTAAAC

Flanking Amino Acid:

PNCYLTQTLKTFLKERFDNE

Intron Amino Acid Position:

2888

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

76.4

0.59

0.9

69.3

Minor 5ss

43.8

-0.7

2.8

58.6

45.8

Minor BPS

53.8

0.1

2.2

71.97

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011979

12456661 - 12742790

286130

ENSAPLT00000047207

12456661 - 12742790

286130