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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12477665_12478513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12477665 - 12478513

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTTCTTTATTA

Flanking Amino Acid:

PTEGWIMQFKVSVGCKTSEK

Intron Amino Acid Position:

2757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.7

0.69

0.8

81.9

28.5

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

67.4

0.54

1.5

74.5

38.1

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130