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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12480899_12482140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12480899 - 12482140

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTGGTGTT

5'SS Class:

major

3'SS Sequence:

CATTACTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTACTT

Flanking Amino Acid:

ASGMALHFSGGCSRTLVTVD

Intron Amino Acid Position:

2555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

68.2

42.9

Major BPS

100

1.24

0.5

100

Major PPT

69.4

0.44

1.1

71.9

37.7

Minor 5ss

33.1

-1.9

3.5

41.8

44.9

Minor BPS

67.9

0.64

1.9

89.07

35.8

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130