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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124882033_124891767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124882033 - 124891767

Intron Length:

9735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTTATTAATT

Flanking Amino Acid:

VGDIIEVVGEVEEGWWEGIL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.4

0.62

72.9

42.2

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

71.8

0.76

1.5

86.09

33.4

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007449

124793814 - 124989287

195474

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857