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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124891892_124908095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124891892 - 124908095

Intron Length:

16204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

CTCCATTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTTCTTTTATCC

Flanking Amino Acid:

GTAQEEQVKPSLKDTTGSES

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

72.1

0.5

0.8

64.6

36.1

Minor 5ss

35.5

-1.6

2.9

42.3

38.1

Minor BPS

56.9

0.19

1.6

66.74

39.4

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474