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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124930402_124937315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124930402 - 124937315

Intron Length:

6914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTTTC

5'SS Class:

major

3'SS Sequence:

TTCTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATCGCATTAAAT

Flanking Amino Acid:

TKIEVDSRTKTKEYCKVIFP

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

34.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

90.4

0.91

0.6

88.7

20.7

Minor 5ss

45.1

-0.5

3.1

60.9

38.3

Minor BPS

55.4

0.25

1.8

72.89

43.5

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474