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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124937411_124955861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124937411 - 124955861

Intron Length:

18451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGCATTTTATTT

Flanking Amino Acid:

EGDVVTLISKDCIDVGWWEG

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.6

0.69

0.8

76.2

32.4

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

49.6

0.05

1.6

64.26

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474