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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12495101_12496176_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12495101 - 12496176

Intron Length:

1076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

ACTGTGTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TAAATCATAAAT

Flanking Amino Acid:

NSDFLKDDFEGQLESDRFLL

Intron Amino Acid Position:

2173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.4

41.9

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

0.45

66.1

43.9

Minor 5ss

56.3

0.21

2.5

76.3

39.1

Minor BPS

50.4

0.09

1.7

69.42

40.4

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130