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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124958158_124961952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124958158 - 124961952

Intron Length:

3795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

CATTCTTTGACA

Flanking Amino Acid:

PSAPVIKQGSGTTDRKHEVK

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

75.8

0.58

37.7

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

73.5

0.74

1.2

74.9

36.7

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007449

124793814 - 124989287

195474

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857