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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124962034_124964793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124962034 - 124964793

Intron Length:

2760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

AATTGATTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTTCTGGAAAT

Flanking Amino Acid:

ECLPNRTEEKERPEREQKQL

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

62.9

0.29

1.2

60.8

43.4

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

53.7

0.19

2.2

82.05

39.3

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474