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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124964957_124969519_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

124964957 - 124969519

Intron Length:

4563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTTT

5'SS Class:

major

3'SS Sequence:

GATCCAAATGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TCTTCTTGATCC

Flanking Amino Acid:

ERPVVPVTHTRSDSPKVELV

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

74.1

36.8

Major BPS

83.8

0.84

73.6

41.8

Major PPT

56.8

0.15

49.3

38.2

Minor 5ss

48.8

-0.1

3.1

73.2

43.6

Minor BPS

59.1

0.26

1.7

70.84

40.8

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474