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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124980242_124981301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124980242 - 124981301

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTAACTACGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GTGTGTTTAACT

Flanking Amino Acid:

RRPPSQSLTSSSLSSPDFFD

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

67.8

0.4

0.9

63.1

38.1

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

66.2

0.59

1.8

80.25

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474