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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124981428_124984503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124981428 - 124984503

Intron Length:

3076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

RKSRTVTISQVSDNKTSLPP

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

77.7

33.3

Major BPS

73.5

0.58

79.3

29.4

Major PPT

92.5

0.96

0.6

87.6

22.8

Minor 5ss

47.2

-0.3

2.9

64.7

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474