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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124984776_124987259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124984776 - 124987259

Intron Length:

2484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTCTTTTAACA

Flanking Amino Acid:

IIVETMKDQQKKEIKQLLSE

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.1

0.7

0.9

77.4

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

74.3

0.76

1.1

78.75

30.7

Associated Gene:

Gene:

SH3KBP1

Ensembl Gene ID:

ENSAPLG00000007164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029641

124772837 - 124989639

216803

ENSAPLT00000007452

124798431 - 124989287

190857

ENSAPLT00000007449

124793814 - 124989287

195474