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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12502590_12503964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12502590 - 12503964

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TAGGTGTTAATA

Flanking Amino Acid:

RFRLWQPYNNGKKEEIWIID

Intron Amino Acid Position:

1931

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.4

33.7

Major BPS

84.4

0.85

34.5

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

34.1

-1.8

3.3

45.4

43.9

Minor BPS

48.3

-0.1

2.1

59.24

41.4

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130