Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_125039445_125042077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125039445 - 125042077

Intron Length:

2633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTTTG

5'SS Class:

major

3'SS Sequence:

TTTACTTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

GTCTCTTTTACT

Flanking Amino Acid:

SLLKDVHVTSCAYYKETLLN

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

73.4

38.1

Major BPS

74.2

0.6

39.4

Major PPT

83.2

0.75

0.7

81.9

Minor 5ss

-0.6

2.8

55.2

43.4

Minor BPS

67.6

0.64

1.6

80.63

41.2

Associated Gene:

Gene:

MAP3K15

Ensembl Gene ID:

ENSAPLG00000007410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026199

125003760 - 125085568

81809

ENSAPLT00000007776

125003760 - 125085568

81809