Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_125063859_125067327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125063859 - 125067327

Intron Length:

3469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CTTTGTTTATCT

Flanking Amino Acid:

EGEIDGDTLEYEYDYDENGE

Intron Amino Acid Position:

631

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

86.4

0.82

0.8

80.9

31.1

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

57.5

0.31

79.06

43.7

Associated Gene:

Gene:

MAP3K15

Ensembl Gene ID:

ENSAPLG00000007410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026199

125003760 - 125085568

81809

ENSAPLT00000007776

125003760 - 125085568

81809