Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_125070113_125074469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125070113 - 125074469

Intron Length:

4357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TAAAACTTGACA

Flanking Amino Acid:

GINPCTETFTGTLQYMAPEI

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

58.9

0.22

49.8

35.1

Major PPT

68.4

0.42

0.9

62.1

39.8

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

58.5

0.26

1.6

66.41

39.1

Associated Gene:

Gene:

MAP3K15

Ensembl Gene ID:

ENSAPLG00000007410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026199

125003760 - 125085568

81809

ENSAPLT00000007776

125003760 - 125085568

81809