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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125088688_125089611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125088688 - 125089611

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TGCTCTGCATCT

Flanking Amino Acid:

FATEHCRAGKGPIVMELQTY

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

33.6

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

63.9

0.31

1.7

76.5

37.6

Minor 5ss

35.2

-1.7

2.9

41.4

39.1

Minor BPS

43.5

-0.4

2.3

64.38

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041039

125086267 - 125099321

13055

ENSAPLT00000008805

125086267 - 125099321

13055