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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12523467_12523853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12523467 - 12523853

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGTAC

U12 Branch Point Sequence:

TCCTTTCTAACA

Flanking Amino Acid:

IPVVNPTLPQNFYEKPAFDY

Intron Amino Acid Position:

1235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.8

38.2

Major BPS

46.5

-0.2

1.3

43.5

38.9

Major PPT

80.2

0.68

0.8

76.7

30.6

Minor 5ss

33.9

-1.8

2.9

44.3

Minor BPS

57.5

0.23

1.7

66.77

40.3

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130