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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125234740_125235494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125234740 - 125235494

Intron Length:

755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATATTC

Flanking Amino Acid:

RGLLQCMMRQVDKVEKFKCT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

85.7

25.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

75.9

0.58

0.9

73.5

41.9

Minor 5ss

-0.2

2.5

66.4

45.1

Minor BPS

0.04

1.8

67.7

Associated Gene:

Gene:

PHKA2

Ensembl Gene ID:

ENSAPLG00000009522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044782

125231876 - 125271031

39156

ENSAPLT00000009964

125231876 - 125271031

39156