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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125238847_125239144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125238847 - 125239144

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTATTTTACAT

Flanking Amino Acid:

VLPDEVEHCQSILYSMLPRA

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.5

31.7

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.6

0.6

0.9

76.2

37.8

Minor 5ss

35.5

-1.7

3.1

50.2

45.8

Minor BPS

51.6

0.13

1.7

71.68

39.3

Associated Gene:

Gene:

PHKA2

Ensembl Gene ID:

ENSAPLG00000009522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044782

125231876 - 125271031

39156

ENSAPLT00000009964

125231876 - 125271031

39156