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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12524026_12524758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12524026 - 12524758

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAATTT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TTCCCCTAAAGT

Flanking Amino Acid:

EMYFSDFSKPRFVYLELPAA

Intron Amino Acid Position:

1177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

76.6

32.8

Major BPS

0.42

1.1

57.3

41.7

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

49.3

-0

2.9

73.4

43.4

Minor BPS

56.9

0.3

77.05

45.4

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130