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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125242318_125243666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125242318 - 125243666

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTGA

5'SS Class:

major

3'SS Sequence:

CTTTTGTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAA

U12 Branch Point Sequence:

TTTAAGGTAATT

Flanking Amino Acid:

PELYAVPPEKVDEEYENPHS

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

61.2

39.9

Major BPS

65.9

0.4

57.6

Major PPT

80.1

0.68

80.3

37.3

Minor 5ss

42.3

-0.9

3.1

56.3

47.9

Minor BPS

44.3

-0.3

2.7

73.4

43.7

Associated Gene:

Gene:

PHKA2

Ensembl Gene ID:

ENSAPLG00000009522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044782

125231876 - 125271031

39156

ENSAPLT00000009964

125231876 - 125271031

39156