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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125248545_125251067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125248545 - 125251067

Intron Length:

2523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

AAGTACTTACAT

Flanking Amino Acid:

RNQIFAFTPQFTDQHHFYLA

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.8

38.7

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

79.9

0.67

0.8

72.5

37.7

Minor 5ss

37.5

-1.4

47.8

47.9

Minor BPS

1.9

66.14

43.8

Associated Gene:

Gene:

PHKA2

Ensembl Gene ID:

ENSAPLG00000009522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044782

125231876 - 125271031

39156

ENSAPLT00000009964

125231876 - 125271031

39156