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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12524965_12528937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12524965 - 12528937

Intron Length:

3973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAACA

5'SS Class:

major

3'SS Sequence:

CTTTCTATTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTATTTTTACCA

Flanking Amino Acid:

SSGSSLYFNKAGKRQLVSWD

Intron Amino Acid Position:

1109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

65.5

40.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

82.3

0.73

0.7

77.9

29.2

Minor 5ss

38.2

-1.3

3.1

50.6

45.4

Minor BPS

65.7

0.49

1.6

75.26

36.4

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130