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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125257911_125259408_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

125257911 - 125259408

Intron Length:

1498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CACATCATGATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TTTCCTGTCACA

Flanking Amino Acid:

LKKRVEVLAEACTDLLSHHK

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

66.8

0.42

1.1

37.7

Major PPT

55.8

0.13

50.4

37.7

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

49.1

-0

2.4

72.26

40.2

Associated Gene:

Gene:

PHKA2

Ensembl Gene ID:

ENSAPLG00000009522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044782

125231876 - 125271031

39156

ENSAPLT00000009964

125231876 - 125271031

39156