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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125266000_125267578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125266000 - 125267578

Intron Length:

1579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGA

5'SS Class:

major

3'SS Sequence:

TTTCTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTCTGTTCATT

Flanking Amino Acid:

YEKVWKILQKCHGLSIDGYV

Intron Amino Acid Position:

1064

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

65.9

42.7

Major BPS

84.8

0.86

85.7

34.9

Major PPT

89.5

0.89

0.7

88.2

29.1

Minor 5ss

41.8

-0.9

3.2

55.7

48.5

Minor BPS

48.3

-0

2.4

76.4

40.9

Associated Gene:

Gene:

PHKA2

Ensembl Gene ID:

ENSAPLG00000009522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009964

125231876 - 125271031

39156

ENSAPLT00000044782

125231876 - 125271031

39156