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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125274301_125274764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125274301 - 125274764

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

AATTTGCCATCT

Flanking Amino Acid:

IFNIMDEDHSGLISFDEFRK

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

76.3

0.59

0.8

74.1

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

38.4

-0.8

2.4

60.28

Associated Gene:

Gene:

PPEF1

Ensembl Gene ID:

ENSAPLG00000010050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010482

125273988 - 125298814

24827