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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125278332_125279735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125278332 - 125279735

Intron Length:

1404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

TTGCTCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CAGTCCTCACTT

Flanking Amino Acid:

SGPTLKEWKQVMDILWSDPR

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

71.3

34.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

0.56

69.3

41.7

Minor 5ss

32.3

-2

3.4

39.2

Minor BPS

49.5

0.04

1.9

64.97

45.8

Associated Gene:

Gene:

PPEF1

Ensembl Gene ID:

ENSAPLG00000010050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010482

125273988 - 125298814

24827