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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125283616_125286739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125283616 - 125286739

Intron Length:

3124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

CAGTCTCCAAAT

Flanking Amino Acid:

LDDLFLIFYKNGLPSEKKPY

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

92.4

0.95

0.6

88.6

20.8

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

44.8

-0.3

1.9

59.38

43.6

Associated Gene:

Gene:

PPEF1

Ensembl Gene ID:

ENSAPLG00000010050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010482

125273988 - 125298814

24827