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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125288903_125290161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125288903 - 125290161

Intron Length:

1259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATTGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAAAA

U12 Branch Point Sequence:

TTTTTTTTCATA

Flanking Amino Acid:

ALLHAFKNGQLLHAHYVLKL

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

66.7

40.1

Major BPS

49.6

-0

1.1

57.3

34.4

Major PPT

90.2

0.9

0.6

87.8

22.4

Minor 5ss

38.8

-1.3

3.1

53.1

44.1

Minor BPS

64.7

0.46

1.7

33.3

Associated Gene:

Gene:

PPEF1

Ensembl Gene ID:

ENSAPLG00000010050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010482

125273988 - 125298814

24827