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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125290326_125294694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125290326 - 125294694

Intron Length:

4369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

GTTTCCACATTC

Flanking Amino Acid:

MLERYASPDAVDDTSSSSSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

82.1

0.72

0.8

76.4

32.2

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

47.6

-0.2

64.69

40.8

Associated Gene:

Gene:

PPEF1

Ensembl Gene ID:

ENSAPLG00000010050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010482

125273988 - 125298814

24827