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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12529125_12529700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12529125 - 12529700

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAGC

5'SS Class:

major

3'SS Sequence:

TGCTTCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AGTCCTTTAAAA

Flanking Amino Acid:

GHGWCDHGVCRCDSGFQGTE

Intron Amino Acid Position:

1046

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

63.4

41.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

77.9

0.63

0.8

36.6

Minor 5ss

32.1

-2

3.2

43.8

43.5

Minor BPS

64.8

0.46

1.4

69.73

35.6

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130