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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12535694_12537995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12535694 - 12537995

Intron Length:

2302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTATTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AATGCTTTATTT

Flanking Amino Acid:

HGLTWHLVQEECLPSMPSCQ

Intron Amino Acid Position:

963

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.2

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

70.8

0.47

1.1

68.1

41.7

Minor 5ss

25.6

-2.8

30.5

42.8

Minor BPS

56.1

0.27

1.7

71.01

40.6

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130