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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125487908_125491277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

125487908 - 125491277

Intron Length:

3370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TATTACTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

CCCCCCCTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.4

37.4

Major BPS

74.8

0.62

1.1

40.5

Major PPT

76.1

0.59

0.9

69.5

36.2

Minor 5ss

30.8

-2.2

3.8

47.7

Minor BPS

56.7

0.29

1.8

69.96

46.6

Associated Gene:

Gene:

SCML2

Ensembl Gene ID:

ENSAPLG00000010725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036153

125487156 - 125547725

60570