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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125507505_125511616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125507505 - 125511616

Intron Length:

4112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TATTTGTTACTT

Flanking Amino Acid:

KKGGMLQPPLGFQMNASSWP

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

35.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

71.8

0.49

0.9

70.7

39.6

Minor 5ss

33.3

-1.9

2.9

35.7

40.8

Minor BPS

51.2

0.11

2.3

76.1

41.2

Associated Gene:

Gene:

SCML2

Ensembl Gene ID:

ENSAPLG00000010725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036153

125487156 - 125547725

60570

ENSAPLT00000011200

125491278 - 125547725

56448