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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125526463_125531028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

125526463 - 125531028

Intron Length:

4566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTCTTGAAAC

Flanking Amino Acid:

RKKSLKPGKKKKIFPEQLSS

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

76.5

38.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.1

0.52

39.4

Minor 5ss

33.2

-1.9

2.8

43.4

43.5

Minor BPS

70.4

0.62

1.5

80.74

33.2

Associated Gene:

Gene:

SCML2

Ensembl Gene ID:

ENSAPLG00000010725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036153

125487156 - 125547725

60570

ENSAPLT00000011200

125491278 - 125547725

56448