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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12552870_12553996_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12552870 - 12553996

Intron Length:

1127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATATGTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTTGTGTTATAT

Flanking Amino Acid:

STIYASENYSGWNRITIPLP

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

0.56

71.1

43.4

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

46.1

-0.2

2.4

72.21

44.9

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011979

12456661 - 12742790

286130

ENSAPLT00000047207

12456661 - 12742790

286130