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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12556453_12558161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12556453 - 12558161

Intron Length:

1709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTATTTAAGC

Flanking Amino Acid:

LDTLTYAAYKVPSLVSVVIS

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

78.1

0.63

78.9

32.8

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

66.3

0.49

1.8

79.02

36.5

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011979

12456661 - 12742790

286130

ENSAPLT00000047207

12456661 - 12742790

286130