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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12561340_12566508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12561340 - 12566508

Intron Length:

5169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGACTTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

CCACTGTTGACT

Flanking Amino Acid:

WAEEFESQPKGWDVFGAVIG

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

78.5

0.64

0.9

69.9

41.3

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

46.5

-0.1

2.1

60.28

43.7

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130