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Intron Name: Anas_platyrhynchos_platyrhynchos_1_125729721_125730947_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

125729721 - 125730947

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGTAGTAT

5'SS Class:

major

3'SS Sequence:

ACGTGTACCCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTTACGTGTACC

Flanking Amino Acid:

GIPRRVQQEIDSDESPVARE

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

66.8

34.4

Major BPS

72.7

0.56

30.1

Major PPT

57.7

0.17

0.9

48.1

39.8

Minor 5ss

38.4

-1.3

3.4

54.5

49.7

Minor BPS

46.5

-0.2

2.5

68.54

42.7

Associated Gene:

Gene:

NHS

Ensembl Gene ID:

ENSAPLG00000011104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034301

125724825 - 125768731

43907

ENSAPLT00000011553

125724825 - 125747364

22540