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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12602390_12608273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12602390 - 12608273

Intron Length:

5884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

CCTAACACAATC

Flanking Amino Acid:

FCEPYGPRELTTTGLNTTTA

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

63.2

0.33

63.6

30.5

Major PPT

85.6

0.8

0.6

81.9

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

-0.6

1.9

49.28

40.9

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011979

12456661 - 12742790

286130

ENSAPLT00000047207

12456661 - 12742790

286130