Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126046069 - 126047695

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTCTCTTCATC

Flanking Amino Acid:

LNSELQQQLKEVHKERIALE

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

82.1

0.72

0.8

73.1

36.9

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

56.4

0.18

1.7

66.76

39.6

Associated Gene:

Gene:

REPS2

Ensembl Gene ID:

ENSAPLG00000011221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026839

126046000 - 126106594

60595

ENSAPLT00000042020

126046000 - 126105416

59417

ENSAPLT00000025271

126046000 - 126108299

62300

ENSAPLT00000039939

126046000 - 126106510

60511

ENSAPLT00000017467

126046000 - 126106510

60511

ENSAPLT00000031472

126046000 - 126104674

58675

ENSAPLT00000044177

126046000 - 126105416

59417

ENSAPLT00000011757

126046000 - 126106558

60559

ENSAPLT00000029376