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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126047802_126049663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126047802 - 126049663

Intron Length:

1862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAACAAT

5'SS Class:

major

3'SS Sequence:

ATCTGTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTGTATTTATCT

Flanking Amino Acid:

PAVKPHLPVQKQSSKQKRAI

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

36.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

70.1

0.45

65.7

40.4

Minor 5ss

42.1

-0.9

3.1

57.3

41.6

Minor BPS

61.6

0.44

1.8

80.6

41.4

Associated Gene:

Gene:

REPS2

Ensembl Gene ID:

ENSAPLG00000011221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029376

126046000 - 126104674

58675

ENSAPLT00000044177

126046000 - 126105416

59417

ENSAPLT00000026839

126046000 - 126106594

60595

ENSAPLT00000043948

126046000 - 126106558

60559

ENSAPLT00000025271

126046000 - 126108299

62300

ENSAPLT00000039939

126046000 - 126106510

60511

ENSAPLT00000011757

126046000 - 126106558

60559

ENSAPLT00000031472

126046000 - 126104674

58675