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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126052308_126077166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126052308 - 126077166

Intron Length:

24859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGGGTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTTAT

U12 Branch Point Sequence:

TTGTATGTGACT

Flanking Amino Acid:

LNKIFQQNTQAVTDLLLQTE

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

0.5

59.6

38.6

Major PPT

66.1

0.36

61.1

40.1

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

49.4

0.04

2.2

75.5

41.8

Associated Gene:

Gene:

REPS2

Ensembl Gene ID:

ENSAPLG00000011221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025271

126046000 - 126108299

62300

ENSAPLT00000017467

126046000 - 126106510

60511

ENSAPLT00000042020

126046000 - 126105416

59417